{
    "area_vx2": 359375.0,
    "base_shape_zyx": [
        18946,
        8174,
        8174
    ],
    "bbox": [
        [
            5319.6416015625,
            3657.75244140625,
            7019.58935546875
        ],
        [
            5534.19580078125,
            4211.37841796875,
            7568.2548828125
        ]
    ],
    "extra_channels": [
        {
            "dtype": "float32",
            "file": "flow_gate_local_contrast.tif",
            "name": "flow_gate_local_contrast",
            "range": [
                0.0,
                1.0
            ],
            "source": "pred_dt_flow_gate.local_contrast",
            "source_config": {
                "backtrack_distance": 50.0,
                "gate_factor": 1.0,
                "grid_step": 4,
                "local_boost": 0.5
            }
        },
        {
            "dtype": "float32",
            "file": "flow_gate_component_normalized.tif",
            "name": "flow_gate_component_normalized",
            "range": [
                0.0,
                1.0
            ],
            "source": "pred_dt_flow_gate.component_normalized",
            "source_config": {
                "backtrack_distance": 50.0,
                "gate_factor": 1.0,
                "grid_step": 4,
                "local_boost": 0.5
            }
        }
    ],
    "fit_config": {
        "_corr_point_roi_init_": {
            "effective_seed": [
                21928.580078125,
                15692.673828125,
                29585.974609375
            ],
            "final_anchor_h": 174.0,
            "final_anchor_w": 59.69077491760254,
            "final_shell_id": "shell_0007.tifxyz",
            "final_trim_bottom": 19,
            "final_trim_top": 13,
            "init_margin_grid_points": 80,
            "initial_seed": [
                21927.087890625,
                15691.71484375,
                29365.849609375
            ],
            "initial_shell_id": "shell_0007.tifxyz",
            "initial_skipped_point_count": 0,
            "initial_skipped_reasons": {},
            "initial_trim_bottom": 19,
            "initial_trim_top": 13,
            "initial_usable_point_count": 10,
            "mode": "corr-point-roi",
            "model_h": 8139.868927001953,
            "model_w": 8034.286308288574,
            "model_w_unit": "voxels",
            "output_radius_grid_points": 20,
            "parsed_point_count": 10,
            "projected_h_span_grid": 2.7973785400390625,
            "projected_h_span_vx": 139.86892700195313,
            "projected_points": [
                {
                    "collection_id": 1604,
                    "direction_sign": 1,
                    "grid_distance_to_anchor": 1.932885094452956,
                    "h": 172.07913208007813,
                    "point_id": 2246,
                    "row_index": 0,
                    "w": 59.905975341796875
                },
                {
                    "collection_id": 1604,
                    "direction_sign": -1,
                    "grid_distance_to_anchor": 2.5171319581383753,
                    "h": 171.4864501953125,
                    "point_id": 2247,
                    "row_index": 1,
                    "w": 59.55653381347656
                },
                {
                    "collection_id": 1604,
                    "direction_sign": -1,
                    "grid_distance_to_anchor": 2.243102794459725,
                    "h": 171.80349731445313,
                    "point_id": 2248,
                    "row_index": 2,
                    "w": 59.23592758178711
                },
                {
                    "collection_id": 1604,
                    "direction_sign": 1,
                    "grid_distance_to_anchor": 0.8509513670207612,
                    "h": 173.2909698486328,
                    "point_id": 2249,
                    "row_index": 3,
                    "w": 59.22024917602539
                },
                {
                    "collection_id": 1604,
                    "direction_sign": 1,
                    "grid_distance_to_anchor": 0.46973082719065046,
                    "h": 173.86155700683594,
                    "point_id": 2250,
                    "row_index": 4,
                    "w": 59.24190902709961
                },
                {
                    "collection_id": 1604,
                    "direction_sign": 1,
                    "grid_distance_to_anchor": 0.40064931049701735,
                    "h": 174.28382873535156,
                    "point_id": 2251,
                    "row_index": 5,
                    "w": 59.40800094604492
                },
                {
                    "collection_id": 1604,
                    "direction_sign": -1,
                    "grid_distance_to_anchor": 0.6852669809355245,
                    "h": 173.3472900390625,
                    "point_id": 2252,
                    "row_index": 6,
                    "w": 59.48206329345703
                },
                {
                    "collection_id": 1604,
                    "direction_sign": -1,
                    "grid_distance_to_anchor": 0.9856802300948456,
                    "h": 173.01644897460938,
                    "point_id": 2253,
                    "row_index": 7,
                    "w": 59.62602233886719
                },
                {
                    "collection_id": 1604,
                    "direction_sign": -1,
                    "grid_distance_to_anchor": 0.7569370878815033,
                    "h": 173.2471923828125,
                    "point_id": 2254,
                    "row_index": 8,
                    "w": 59.76973342895508
                },
                {
                    "collection_id": 1604,
                    "direction_sign": -1,
                    "grid_distance_to_anchor": 0.884320161806858,
                    "h": 173.11654663085938,
                    "point_id": 2255,
                    "row_index": 9,
                    "w": 59.72991943359375
                }
            ],
            "projected_w_span_grid": 0.6857261657714844,
            "projected_w_span_vx": 34.28630828857422,
            "projection_mode": "normal-line",
            "skipped_point_count": 0,
            "skipped_points": [],
            "skipped_reasons": {},
            "usable_point_count": 10,
            "windings": 1
        },
        "args": {
            "approval-inpaint": false,
            "approval-inpaint-corr-spacing": null,
            "approval-inpaint-output-mask": false,
            "approval-inpaint-output-mask-dilate": 3,
            "approval-inpaint-padding-frac": 0.25,
            "approval-inpaint-tifxyz": null,
            "corr-point-roi": true,
            "corr-point-roi-init-margin": 80,
            "corr-point-roi-output-radius": 20,
            "crop": null,
            "cuda-gridsample": 1,
            "depth": 1,
            "device": "cuda",
            "downscale": 4.0,
            "erode-valid-mask": 0,
            "flatten-solver": "torch",
            "init-mode": "shell-dir-crop",
            "input": "/ephemeral/lasag_strip_outputs/.lasagna_point_strip_work/collection_1604/point_strip.lasagna.json",
            "mesh-h": 32,
            "mesh-step": 50,
            "mesh-w": 32,
            "model-h": 8139.868927001953,
            "model-init": "seed",
            "model-input": null,
            "model-output": "/tmp/fit_reopt_n4guzqd1/model_reopt.pt",
            "model-w": 8034.286308288574,
            "model-w-unit": "voxels",
            "normal-mask-zero": 0,
            "out-dir": null,
            "progress": true,
            "pyramid-d": false,
            "seed": [
                21928.580078125,
                15692.673828125,
                29585.974609375
            ],
            "snapshot-interval": 1000,
            "sparse-prefetch-backend": "tensorstore",
            "subsample-mesh": 4,
            "subsample-winding": 4,
            "tifxyz-flow-gate-channels": true,
            "tifxyz-init": null,
            "winding-step": 25,
            "winding-volume": null,
            "windings": 1,
            "z-center": 0.0
        },
        "base": {
            "bend": 100.0,
            "corr": 0.0001,
            "data": 0.0,
            "data_plain": 0.0,
            "ext_offset": 0.0,
            "normal": 1.0,
            "pred_dt": 0.001,
            "smooth": 10.0,
            "station_n": 0.1,
            "station_t": 0.1,
            "step": 10.0,
            "winding_density": 0.01
        },
        "corr_points": {
            "collections": {
                "1604": {
                    "color": [
                        0.0,
                        0.47058823704719543,
                        1.0
                    ],
                    "metadata": {
                        "winding_is_absolute": true
                    },
                    "name": "same_wrap987",
                    "points": {
                        "2246": {
                            "creation_time": 2246,
                            "p": [
                                21915.322265625,
                                15684.146484375,
                                29079.767578125
                            ],
                            "wind_a": 0.0
                        },
                        "2247": {
                            "creation_time": 2247,
                            "p": [
                                21915.322265625,
                                15684.146484375,
                                29136.24609375
                            ],
                            "wind_a": 0.0
                        },
                        "2248": {
                            "creation_time": 2248,
                            "p": [
                                21910.650390625,
                                15681.142578125,
                                29213.9453125
                            ],
                            "wind_a": 0.0
                        },
                        "2249": {
                            "creation_time": 2249,
                            "p": [
                                21915.322265625,
                                15684.146484375,
                                29291.64453125
                            ],
                            "wind_a": 0.0
                        },
                        "2250": {
                            "creation_time": 2250,
                            "p": [
                                21927.087890625,
                                15691.71484375,
                                29365.849609375
                            ],
                            "wind_a": 0.0
                        },
                        "2251": {
                            "creation_time": 2251,
                            "p": [
                                21944.9453125,
                                15703.2001953125,
                                29437.056640625
                            ],
                            "wind_a": 0.0
                        },
                        "2252": {
                            "creation_time": 2252,
                            "p": [
                                21948.013671875,
                                15705.173828125,
                                29515.544921875
                            ],
                            "wind_a": 0.0
                        },
                        "2253": {
                            "creation_time": 2253,
                            "p": [
                                21928.580078125,
                                15692.673828125,
                                29585.974609375
                            ],
                            "wind_a": 0.0
                        },
                        "2254": {
                            "creation_time": 2254,
                            "p": [
                                21890.91015625,
                                15668.4443359375,
                                29647.421875
                            ],
                            "wind_a": 0.0
                        },
                        "2255": {
                            "creation_time": 2255,
                            "p": [
                                21840.59765625,
                                15636.0830078125,
                                29696.13671875
                            ],
                            "wind_a": 0.0
                        }
                    }
                }
            }
        },
        "lasagna_base_shape_zyx": [
            75784,
            32693,
            32693
        ],
        "stages": [
            {
                "lr": 0.1,
                "min_scaledown": 0,
                "name": "stage0",
                "params": [
                    "mesh_ms"
                ],
                "steps": 1000,
                "w_fac": {
                    "corr": 0.0,
                    "pred_dt": 0.0,
                    "station_n": 10.0,
                    "station_t": 10.0
                }
            },
            {
                "lr": 0.1,
                "min_scaledown": 0,
                "name": "stage1",
                "params": [
                    "mesh_ms"
                ],
                "steps": 1000,
                "w_fac": {
                    "pred_dt": 0.0,
                    "station_n": 10.0,
                    "station_t": 10.0
                }
            },
            {
                "lr": 0.01,
                "min_scaledown": 0,
                "name": "stage2",
                "params": [
                    "mesh_ms"
                ],
                "steps": 500,
                "w_fac": {
                    "pred_dt": 0.0,
                    "station_n": 10.0,
                    "station_t": 10.0
                }
            },
            {
                "_lr": [
                    10.0,
                    1.0,
                    0.1,
                    0.01,
                    0.001
                ],
                "args": {
                    "pred_dt_flow_gate": {
                        "anticipatory_pull": {
                            "_debug_roi_center_xyz": [
                                17499,
                                13412,
                                51144
                            ],
                            "debug_roi_k": 8,
                            "debug_roi_root_min": 0.5,
                            "debug_roi_tip_max": 0.5,
                            "debug_slice_upsample": 8,
                            "enabled": true,
                            "inlier_one": 120.0,
                            "inlier_zero": 80.0,
                            "loss_weight": 2.0,
                            "samples": 8
                        },
                        "backtrack_distance": 50.0,
                        "debug": false,
                        "debug_out_dir": "/home/ubuntu/villa/lasagna",
                        "debug_vis_interval": 0,
                        "enabled": true,
                        "gate_factor": 1.0,
                        "local_boost": 0.5
                    },
                    "status_interval": 10
                },
                "dlr": [
                    1.0,
                    0.1,
                    0.01,
                    0.001,
                    0.0001
                ],
                "lr": 1.0,
                "min_scaledown": 0,
                "name": "snap",
                "params": [
                    "mesh_ms"
                ],
                "steps": 500
            }
        ],
        "vc3d_volume_shape_zyx": [
            18946,
            8174,
            8174
        ]
    },
    "format": "tifxyz",
    "lasagna_base_shape_zyx": [
        75784,
        32693,
        32693
    ],
    "lasagna_job": {
        "config": {
            "args": {
                "corr-point-roi": true,
                "corr-point-roi-init-margin": 80,
                "corr-point-roi-output-radius": 20,
                "init-mode": "shell-dir-crop",
                "mesh-step": 50.0,
                "model-h": 5000.0,
                "model-init": "seed",
                "model-w": 5000.0,
                "model-w-unit": "voxels",
                "seed": [
                    5486.236328125,
                    3925.800048828125,
                    7359.26416015625
                ],
                "tifxyz-flow-gate-channels": true,
                "windings": 1
            },
            "base": {
                "bend": 100.0,
                "corr": 0.0001,
                "data": 0.0,
                "data_plain": 0.0,
                "ext_offset": 0.0,
                "normal": 1.0,
                "pred_dt": 0.001,
                "smooth": 10.0,
                "station_n": 0.1,
                "station_t": 0.1,
                "step": 10.0,
                "winding_density": 0.01
            },
            "corr_points": {
                "collections": {
                    "1604": {
                        "color": [
                            0.0,
                            0.47058823704719543,
                            1.0
                        ],
                        "metadata": {
                            "winding_is_absolute": true
                        },
                        "name": "same_wrap987",
                        "points": {
                            "2246": {
                                "creation_time": 2246,
                                "p": [
                                    5478.83056640625,
                                    3921.03662109375,
                                    7269.94189453125
                                ],
                                "wind_a": 0.0
                            },
                            "2247": {
                                "creation_time": 2247,
                                "p": [
                                    5478.83056640625,
                                    3921.03662109375,
                                    7284.0615234375
                                ],
                                "wind_a": 0.0
                            },
                            "2248": {
                                "creation_time": 2248,
                                "p": [
                                    5477.66259765625,
                                    3920.28564453125,
                                    7303.486328125
                                ],
                                "wind_a": 0.0
                            },
                            "2249": {
                                "creation_time": 2249,
                                "p": [
                                    5478.83056640625,
                                    3921.03662109375,
                                    7322.9111328125
                                ],
                                "wind_a": 0.0
                            },
                            "2250": {
                                "creation_time": 2250,
                                "p": [
                                    5481.77197265625,
                                    3922.9287109375,
                                    7341.46240234375
                                ],
                                "wind_a": 0.0
                            },
                            "2251": {
                                "creation_time": 2251,
                                "p": [
                                    5486.236328125,
                                    3925.800048828125,
                                    7359.26416015625
                                ],
                                "wind_a": 0.0
                            },
                            "2252": {
                                "creation_time": 2252,
                                "p": [
                                    5487.00341796875,
                                    3926.29345703125,
                                    7378.88623046875
                                ],
                                "wind_a": 0.0
                            },
                            "2253": {
                                "creation_time": 2253,
                                "p": [
                                    5482.14501953125,
                                    3923.16845703125,
                                    7396.49365234375
                                ],
                                "wind_a": 0.0
                            },
                            "2254": {
                                "creation_time": 2254,
                                "p": [
                                    5472.7275390625,
                                    3917.111083984375,
                                    7411.85546875
                                ],
                                "wind_a": 0.0
                            },
                            "2255": {
                                "creation_time": 2255,
                                "p": [
                                    5460.1494140625,
                                    3909.020751953125,
                                    7424.0341796875
                                ],
                                "wind_a": 0.0
                            }
                        }
                    }
                }
            },
            "stages": [
                {
                    "lr": 0.1,
                    "min_scaledown": 0,
                    "name": "stage0",
                    "params": [
                        "mesh_ms"
                    ],
                    "steps": 1000,
                    "w_fac": {
                        "corr": 0.0,
                        "pred_dt": 0.0,
                        "station_n": 10.0,
                        "station_t": 10.0
                    }
                },
                {
                    "lr": 0.1,
                    "min_scaledown": 0,
                    "name": "stage1",
                    "params": [
                        "mesh_ms"
                    ],
                    "steps": 1000,
                    "w_fac": {
                        "pred_dt": 0.0,
                        "station_n": 10.0,
                        "station_t": 10.0
                    }
                },
                {
                    "lr": 0.01,
                    "min_scaledown": 0,
                    "name": "stage2",
                    "params": [
                        "mesh_ms"
                    ],
                    "steps": 500,
                    "w_fac": {
                        "pred_dt": 0.0,
                        "station_n": 10.0,
                        "station_t": 10.0
                    }
                },
                {
                    "_lr": [
                        10.0,
                        1.0,
                        0.1,
                        0.01,
                        0.001
                    ],
                    "args": {
                        "pred_dt_flow_gate": {
                            "anticipatory_pull": {
                                "_debug_roi_center_xyz": [
                                    17499,
                                    13412,
                                    51144
                                ],
                                "debug_roi_k": 8,
                                "debug_roi_root_min": 0.5,
                                "debug_roi_tip_max": 0.5,
                                "debug_slice_upsample": 8,
                                "enabled": true,
                                "inlier_one": 120.0,
                                "inlier_zero": 80.0,
                                "loss_weight": 2.0,
                                "samples": 8
                            },
                            "backtrack_distance": 50.0,
                            "debug": false,
                            "debug_out_dir": "/home/ubuntu/villa/lasagna",
                            "debug_vis_interval": 0,
                            "enabled": true,
                            "gate_factor": 1.0,
                            "local_boost": 0.5
                        },
                        "status_interval": 10
                    },
                    "dlr": [
                        1.0,
                        0.1,
                        0.01,
                        0.001,
                        0.0001
                    ],
                    "lr": 1.0,
                    "min_scaledown": 0,
                    "name": "snap",
                    "params": [
                        "mesh_ms"
                    ],
                    "steps": 500
                }
            ]
        },
        "linked_surfaces": [],
        "model": null,
        "volume_shape_zyx": [
            18946,
            8174,
            8174
        ]
    },
    "model_source": "/tmp/fit_reopt_n4guzqd1/model_reopt.pt",
    "scale": [
        0.07999999821186066,
        0.07999999821186066
    ],
    "tags": {
        "date_last_modified": "20260614185644237",
        "reviewed": {
            "date": "20260604080934210"
        }
    },
    "type": "seg",
    "uuid": "same_wrap000987_lasagna"
}