{
    "area_vx2": 352343.75,
    "base_shape_zyx": [
        18946,
        8174,
        8174
    ],
    "bbox": [
        [
            5506.1259765625,
            1983.37744140625,
            8242.83203125
        ],
        [
            5579.90673828125,
            2368.88134765625,
            8783.83984375
        ]
    ],
    "extra_channels": [
        {
            "dtype": "float32",
            "file": "flow_gate_local_contrast.tif",
            "name": "flow_gate_local_contrast",
            "range": [
                0.0,
                1.0
            ],
            "source": "pred_dt_flow_gate.local_contrast",
            "source_config": {
                "backtrack_distance": 50.0,
                "gate_factor": 1.0,
                "grid_step": 4,
                "local_boost": 0.5
            }
        },
        {
            "dtype": "float32",
            "file": "flow_gate_component_normalized.tif",
            "name": "flow_gate_component_normalized",
            "range": [
                0.0,
                1.0
            ],
            "source": "pred_dt_flow_gate.component_normalized",
            "source_config": {
                "backtrack_distance": 50.0,
                "gate_factor": 1.0,
                "grid_step": 4,
                "local_boost": 0.5
            }
        }
    ],
    "fit_config": {
        "_corr_point_roi_init_": {
            "effective_seed": [
                22132.38671875,
                8009.8466796875,
                34000.0
            ],
            "final_anchor_h": 187.5637728869915,
            "final_anchor_w": 26.352980196475983,
            "final_shell_id": "shell_0006.tifxyz",
            "final_trim_bottom": 57,
            "final_trim_top": 15,
            "init_margin_grid_points": 80,
            "initial_seed": [
                22162.453125,
                8077.392578125,
                34000.0
            ],
            "initial_shell_id": "shell_0006.tifxyz",
            "initial_skipped_point_count": 0,
            "initial_skipped_reasons": {},
            "initial_trim_bottom": 57,
            "initial_trim_top": 15,
            "initial_usable_point_count": 10,
            "mode": "corr-point-roi",
            "model_h": 8010.352325439453,
            "model_w": 8198.79379272461,
            "model_w_unit": "voxels",
            "output_radius_grid_points": 20,
            "parsed_point_count": 10,
            "projected_h_span_grid": 0.2070465087890625,
            "projected_h_span_vx": 10.352325439453125,
            "projected_points": [
                {
                    "collection_id": 1938,
                    "direction_sign": -1,
                    "grid_distance_to_anchor": 2.0719460849050275,
                    "h": 187.46658325195313,
                    "point_id": 64929,
                    "row_index": 0,
                    "w": 28.422645568847656
                },
                {
                    "collection_id": 1938,
                    "direction_sign": -1,
                    "grid_distance_to_anchor": 1.6859552097784485,
                    "h": 187.4815673828125,
                    "point_id": 64930,
                    "row_index": 1,
                    "w": 28.036930084228516
                },
                {
                    "collection_id": 1938,
                    "direction_sign": -1,
                    "grid_distance_to_anchor": 1.2714056366794177,
                    "h": 187.53895568847656,
                    "point_id": 64931,
                    "row_index": 2,
                    "w": 27.624143600463867
                },
                {
                    "collection_id": 1938,
                    "direction_sign": -1,
                    "grid_distance_to_anchor": 0.8459287575185731,
                    "h": 187.53082275390625,
                    "point_id": 64932,
                    "row_index": 3,
                    "w": 27.198266983032227
                },
                {
                    "collection_id": 1938,
                    "direction_sign": -1,
                    "grid_distance_to_anchor": 0.437147645803388,
                    "h": 187.5261688232422,
                    "point_id": 64933,
                    "row_index": 4,
                    "w": 26.78850746154785
                },
                {
                    "collection_id": 1938,
                    "direction_sign": -1,
                    "grid_distance_to_anchor": 0.03937466379360529,
                    "h": 187.54544067382813,
                    "point_id": 64934,
                    "row_index": 5,
                    "w": 26.387826919555664
                },
                {
                    "collection_id": 1938,
                    "direction_sign": -1,
                    "grid_distance_to_anchor": 0.3838422856983363,
                    "h": 187.54336547851563,
                    "point_id": 64935,
                    "row_index": 6,
                    "w": 25.969680786132813
                },
                {
                    "collection_id": 1938,
                    "direction_sign": -1,
                    "grid_distance_to_anchor": 0.8940580869201139,
                    "h": 187.58145141601563,
                    "point_id": 64936,
                    "row_index": 7,
                    "w": 25.459096908569336
                },
                {
                    "collection_id": 1938,
                    "direction_sign": 1,
                    "grid_distance_to_anchor": 1.5058666625782533,
                    "h": 187.62591552734375,
                    "point_id": 64937,
                    "row_index": 8,
                    "w": 24.84839630126953
                },
                {
                    "collection_id": 1938,
                    "direction_sign": 1,
                    "grid_distance_to_anchor": 1.9093734403872902,
                    "h": 187.6736297607422,
                    "point_id": 64938,
                    "row_index": 9,
                    "w": 24.44676971435547
                }
            ],
            "projected_w_span_grid": 3.9758758544921875,
            "projected_w_span_vx": 198.79379272460938,
            "projection_mode": "normal-line",
            "skipped_point_count": 0,
            "skipped_points": [],
            "skipped_reasons": {},
            "usable_point_count": 10,
            "windings": 1
        },
        "args": {
            "approval-inpaint": false,
            "approval-inpaint-corr-spacing": null,
            "approval-inpaint-output-mask": false,
            "approval-inpaint-output-mask-dilate": 3,
            "approval-inpaint-padding-frac": 0.25,
            "approval-inpaint-tifxyz": null,
            "corr-point-roi": true,
            "corr-point-roi-init-margin": 80,
            "corr-point-roi-output-radius": 20,
            "crop": null,
            "cuda-gridsample": 1,
            "depth": 1,
            "device": "cuda",
            "downscale": 4.0,
            "erode-valid-mask": 0,
            "flatten-solver": "torch",
            "init-mode": "shell-dir-crop",
            "input": "/ephemeral/lasag_strip_outputs/.lasagna_point_strip_work/collection_1938/point_strip.lasagna.json",
            "mesh-h": 32,
            "mesh-step": 50,
            "mesh-w": 32,
            "model-h": 8010.352325439453,
            "model-init": "seed",
            "model-input": null,
            "model-output": "/tmp/fit_reopt_am8qkt0_/model_reopt.pt",
            "model-w": 8198.79379272461,
            "model-w-unit": "voxels",
            "normal-mask-zero": 0,
            "out-dir": null,
            "progress": true,
            "pyramid-d": false,
            "seed": [
                22132.38671875,
                8009.8466796875,
                34000.0
            ],
            "snapshot-interval": 1000,
            "sparse-prefetch-backend": "tensorstore",
            "subsample-mesh": 4,
            "subsample-winding": 4,
            "tifxyz-flow-gate-channels": true,
            "tifxyz-init": null,
            "winding-step": 25,
            "winding-volume": null,
            "windings": 1,
            "z-center": 0.0
        },
        "base": {
            "bend": 100.0,
            "corr": 0.0001,
            "data": 0.0,
            "data_plain": 0.0,
            "ext_offset": 0.0,
            "normal": 1.0,
            "pred_dt": 0.001,
            "smooth": 10.0,
            "station_n": 0.1,
            "station_t": 0.1,
            "step": 10.0,
            "winding_density": 0.01
        },
        "corr_points": {
            "collections": {
                "1938": {
                    "color": [
                        0.47058823704719543,
                        0.3137255012989044,
                        1.0
                    ],
                    "metadata": {
                        "winding_is_absolute": true
                    },
                    "name": "same_wrap1343",
                    "points": {
                        "64929": {
                            "creation_time": 1779508274307,
                            "p": [
                                22218.830078125,
                                8374.041015625,
                                34000.0
                            ],
                            "wind_a": 0.0
                        },
                        "64930": {
                            "creation_time": 1779508274313,
                            "p": [
                                22207.5546875,
                                8298.7109375,
                                34000.0
                            ],
                            "wind_a": 0.0
                        },
                        "64931": {
                            "creation_time": 1779508274317,
                            "p": [
                                22203.796875,
                                8220.267578125,
                                34000.0
                            ],
                            "wind_a": 0.0
                        },
                        "64932": {
                            "creation_time": 1779508274321,
                            "p": [
                                22189.9765625,
                                8145.9921875,
                                34000.0
                            ],
                            "wind_a": 0.0
                        },
                        "64933": {
                            "creation_time": 1779508274325,
                            "p": [
                                22162.453125,
                                8077.392578125,
                                34000.0
                            ],
                            "wind_a": 0.0
                        },
                        "64934": {
                            "creation_time": 1779508274330,
                            "p": [
                                22132.38671875,
                                8009.8466796875,
                                34000.0
                            ],
                            "wind_a": 0.0
                        },
                        "64935": {
                            "creation_time": 1779508274334,
                            "p": [
                                22097.341796875,
                                7944.36328125,
                                34000.0
                            ],
                            "wind_a": 0.0
                        },
                        "64936": {
                            "creation_time": 1779508274338,
                            "p": [
                                22044.591796875,
                                7889.205078125,
                                34000.0
                            ],
                            "wind_a": 0.0
                        },
                        "64937": {
                            "creation_time": 1779508274343,
                            "p": [
                                21975.2109375,
                                7877.25390625,
                                34000.0
                            ],
                            "wind_a": 0.0
                        },
                        "64938": {
                            "creation_time": 1779508274347,
                            "p": [
                                21918.15625,
                                7900.48046875,
                                34000.0
                            ],
                            "wind_a": 0.0
                        }
                    }
                }
            }
        },
        "lasagna_base_shape_zyx": [
            75784,
            32693,
            32693
        ],
        "stages": [
            {
                "lr": 0.1,
                "min_scaledown": 0,
                "name": "stage0",
                "params": [
                    "mesh_ms"
                ],
                "steps": 1000,
                "w_fac": {
                    "corr": 0.0,
                    "pred_dt": 0.0,
                    "station_n": 10.0,
                    "station_t": 10.0
                }
            },
            {
                "lr": 0.1,
                "min_scaledown": 0,
                "name": "stage1",
                "params": [
                    "mesh_ms"
                ],
                "steps": 1000,
                "w_fac": {
                    "pred_dt": 0.0,
                    "station_n": 10.0,
                    "station_t": 10.0
                }
            },
            {
                "lr": 0.01,
                "min_scaledown": 0,
                "name": "stage2",
                "params": [
                    "mesh_ms"
                ],
                "steps": 500,
                "w_fac": {
                    "pred_dt": 0.0,
                    "station_n": 10.0,
                    "station_t": 10.0
                }
            },
            {
                "_lr": [
                    10.0,
                    1.0,
                    0.1,
                    0.01,
                    0.001
                ],
                "args": {
                    "pred_dt_flow_gate": {
                        "anticipatory_pull": {
                            "_debug_roi_center_xyz": [
                                17499,
                                13412,
                                51144
                            ],
                            "debug_roi_k": 8,
                            "debug_roi_root_min": 0.5,
                            "debug_roi_tip_max": 0.5,
                            "debug_slice_upsample": 8,
                            "enabled": true,
                            "inlier_one": 120.0,
                            "inlier_zero": 80.0,
                            "loss_weight": 2.0,
                            "samples": 8
                        },
                        "backtrack_distance": 50.0,
                        "debug": false,
                        "debug_out_dir": "/home/ubuntu/villa/lasagna",
                        "debug_vis_interval": 0,
                        "enabled": true,
                        "gate_factor": 1.0,
                        "local_boost": 0.5
                    },
                    "status_interval": 10
                },
                "dlr": [
                    1.0,
                    0.1,
                    0.01,
                    0.001,
                    0.0001
                ],
                "lr": 1.0,
                "min_scaledown": 0,
                "name": "snap",
                "params": [
                    "mesh_ms"
                ],
                "steps": 500
            }
        ],
        "vc3d_volume_shape_zyx": [
            18946,
            8174,
            8174
        ]
    },
    "format": "tifxyz",
    "lasagna_base_shape_zyx": [
        75784,
        32693,
        32693
    ],
    "lasagna_job": {
        "config": {
            "args": {
                "corr-point-roi": true,
                "corr-point-roi-init-margin": 80,
                "corr-point-roi-output-radius": 20,
                "init-mode": "shell-dir-crop",
                "mesh-step": 50.0,
                "model-h": 5000.0,
                "model-init": "seed",
                "model-w": 5000.0,
                "model-w-unit": "voxels",
                "seed": [
                    5533.0966796875,
                    2002.461669921875,
                    8500.0
                ],
                "tifxyz-flow-gate-channels": true,
                "windings": 1
            },
            "base": {
                "bend": 100.0,
                "corr": 0.0001,
                "data": 0.0,
                "data_plain": 0.0,
                "ext_offset": 0.0,
                "normal": 1.0,
                "pred_dt": 0.001,
                "smooth": 10.0,
                "station_n": 0.1,
                "station_t": 0.1,
                "step": 10.0,
                "winding_density": 0.01
            },
            "corr_points": {
                "collections": {
                    "1938": {
                        "color": [
                            0.47058823704719543,
                            0.3137255012989044,
                            1.0
                        ],
                        "metadata": {
                            "winding_is_absolute": true
                        },
                        "name": "same_wrap1343",
                        "points": {
                            "64929": {
                                "creation_time": 1779508274307,
                                "p": [
                                    5554.70751953125,
                                    2093.51025390625,
                                    8500.0
                                ],
                                "wind_a": 0.0
                            },
                            "64930": {
                                "creation_time": 1779508274313,
                                "p": [
                                    5551.888671875,
                                    2074.677734375,
                                    8500.0
                                ],
                                "wind_a": 0.0
                            },
                            "64931": {
                                "creation_time": 1779508274317,
                                "p": [
                                    5550.94921875,
                                    2055.06689453125,
                                    8500.0
                                ],
                                "wind_a": 0.0
                            },
                            "64932": {
                                "creation_time": 1779508274321,
                                "p": [
                                    5547.494140625,
                                    2036.498046875,
                                    8500.0
                                ],
                                "wind_a": 0.0
                            },
                            "64933": {
                                "creation_time": 1779508274325,
                                "p": [
                                    5540.61328125,
                                    2019.34814453125,
                                    8500.0
                                ],
                                "wind_a": 0.0
                            },
                            "64934": {
                                "creation_time": 1779508274330,
                                "p": [
                                    5533.0966796875,
                                    2002.461669921875,
                                    8500.0
                                ],
                                "wind_a": 0.0
                            },
                            "64935": {
                                "creation_time": 1779508274334,
                                "p": [
                                    5524.33544921875,
                                    1986.0908203125,
                                    8500.0
                                ],
                                "wind_a": 0.0
                            },
                            "64936": {
                                "creation_time": 1779508274338,
                                "p": [
                                    5511.14794921875,
                                    1972.30126953125,
                                    8500.0
                                ],
                                "wind_a": 0.0
                            },
                            "64937": {
                                "creation_time": 1779508274343,
                                "p": [
                                    5493.802734375,
                                    1969.3134765625,
                                    8500.0
                                ],
                                "wind_a": 0.0
                            },
                            "64938": {
                                "creation_time": 1779508274347,
                                "p": [
                                    5479.5390625,
                                    1975.1201171875,
                                    8500.0
                                ],
                                "wind_a": 0.0
                            }
                        }
                    }
                }
            },
            "stages": [
                {
                    "lr": 0.1,
                    "min_scaledown": 0,
                    "name": "stage0",
                    "params": [
                        "mesh_ms"
                    ],
                    "steps": 1000,
                    "w_fac": {
                        "corr": 0.0,
                        "pred_dt": 0.0,
                        "station_n": 10.0,
                        "station_t": 10.0
                    }
                },
                {
                    "lr": 0.1,
                    "min_scaledown": 0,
                    "name": "stage1",
                    "params": [
                        "mesh_ms"
                    ],
                    "steps": 1000,
                    "w_fac": {
                        "pred_dt": 0.0,
                        "station_n": 10.0,
                        "station_t": 10.0
                    }
                },
                {
                    "lr": 0.01,
                    "min_scaledown": 0,
                    "name": "stage2",
                    "params": [
                        "mesh_ms"
                    ],
                    "steps": 500,
                    "w_fac": {
                        "pred_dt": 0.0,
                        "station_n": 10.0,
                        "station_t": 10.0
                    }
                },
                {
                    "_lr": [
                        10.0,
                        1.0,
                        0.1,
                        0.01,
                        0.001
                    ],
                    "args": {
                        "pred_dt_flow_gate": {
                            "anticipatory_pull": {
                                "_debug_roi_center_xyz": [
                                    17499,
                                    13412,
                                    51144
                                ],
                                "debug_roi_k": 8,
                                "debug_roi_root_min": 0.5,
                                "debug_roi_tip_max": 0.5,
                                "debug_slice_upsample": 8,
                                "enabled": true,
                                "inlier_one": 120.0,
                                "inlier_zero": 80.0,
                                "loss_weight": 2.0,
                                "samples": 8
                            },
                            "backtrack_distance": 50.0,
                            "debug": false,
                            "debug_out_dir": "/home/ubuntu/villa/lasagna",
                            "debug_vis_interval": 0,
                            "enabled": true,
                            "gate_factor": 1.0,
                            "local_boost": 0.5
                        },
                        "status_interval": 10
                    },
                    "dlr": [
                        1.0,
                        0.1,
                        0.01,
                        0.001,
                        0.0001
                    ],
                    "lr": 1.0,
                    "min_scaledown": 0,
                    "name": "snap",
                    "params": [
                        "mesh_ms"
                    ],
                    "steps": 500
                }
            ]
        },
        "linked_surfaces": [],
        "model": null,
        "volume_shape_zyx": [
            18946,
            8174,
            8174
        ]
    },
    "model_source": "/tmp/fit_reopt_am8qkt0_/model_reopt.pt",
    "scale": [
        0.07999999821186066,
        0.07999999821186066
    ],
    "tags": {
        "date_last_modified": "20260614185644311",
        "reviewed": {
            "date": "20260604080934226"
        }
    },
    "type": "seg",
    "uuid": "same_wrap001343_lasagna"
}