{
    "area_vx2": 416718.75,
    "base_shape_zyx": [
        18946,
        8174,
        8174
    ],
    "bbox": [
        [
            4965.97412109375,
            2383.638916015625,
            8708.12109375
        ],
        [
            5438.57763671875,
            2769.3212890625,
            9272.53125
        ]
    ],
    "extra_channels": [
        {
            "dtype": "float32",
            "file": "flow_gate_local_contrast.tif",
            "name": "flow_gate_local_contrast",
            "range": [
                0.0,
                1.0
            ],
            "source": "pred_dt_flow_gate.local_contrast",
            "source_config": {
                "backtrack_distance": 50.0,
                "gate_factor": 1.0,
                "grid_step": 4,
                "local_boost": 0.5
            }
        },
        {
            "dtype": "float32",
            "file": "flow_gate_component_normalized.tif",
            "name": "flow_gate_component_normalized",
            "range": [
                0.0,
                1.0
            ],
            "source": "pred_dt_flow_gate.component_normalized",
            "source_config": {
                "backtrack_distance": 50.0,
                "gate_factor": 1.0,
                "grid_step": 4,
                "local_boost": 0.5
            }
        }
    ],
    "fit_config": {
        "_corr_point_roi_init_": {
            "effective_seed": [
                21595.986328125,
                9700.78515625,
                36000.0
            ],
            "final_anchor_h": 215.60965019837022,
            "final_anchor_w": 21.054009322077036,
            "final_shell_id": "shell_0007.tifxyz",
            "final_trim_bottom": 35,
            "final_trim_top": 0,
            "init_margin_grid_points": 80,
            "initial_seed": [
                21316.224609375,
                9663.294921875,
                36000.0
            ],
            "initial_shell_id": "shell_0007.tifxyz",
            "initial_skipped_point_count": 0,
            "initial_skipped_reasons": {},
            "initial_trim_bottom": 35,
            "initial_trim_top": 0,
            "initial_usable_point_count": 11,
            "mode": "corr-point-roi",
            "model_h": 8220.844268798828,
            "model_w": 8245.035076141357,
            "model_w_unit": "voxels",
            "output_radius_grid_points": 20,
            "parsed_point_count": 11,
            "projected_h_span_grid": 4.4168853759765625,
            "projected_h_span_vx": 220.84426879882813,
            "projected_points": [
                {
                    "collection_id": 2206,
                    "direction_sign": -1,
                    "grid_distance_to_anchor": 2.956831040266041,
                    "h": 215.70555114746094,
                    "point_id": 75873,
                    "row_index": 0,
                    "w": 18.09873390197754
                },
                {
                    "collection_id": 2206,
                    "direction_sign": -1,
                    "grid_distance_to_anchor": 2.408084905807738,
                    "h": 215.67832946777344,
                    "point_id": 75874,
                    "row_index": 1,
                    "w": 18.64690399169922
                },
                {
                    "collection_id": 2206,
                    "direction_sign": -1,
                    "grid_distance_to_anchor": 1.8572228549933438,
                    "h": 215.65823364257813,
                    "point_id": 75875,
                    "row_index": 2,
                    "w": 19.19742202758789
                },
                {
                    "collection_id": 2206,
                    "direction_sign": -1,
                    "grid_distance_to_anchor": 1.3109923489459425,
                    "h": 215.64451599121094,
                    "point_id": 75876,
                    "row_index": 3,
                    "w": 19.743480682373047
                },
                {
                    "collection_id": 2206,
                    "direction_sign": 1,
                    "grid_distance_to_anchor": 0.7128409918272973,
                    "h": 215.68490600585938,
                    "point_id": 75877,
                    "row_index": 4,
                    "w": 20.345151901245117
                },
                {
                    "collection_id": 2206,
                    "direction_sign": 1,
                    "grid_distance_to_anchor": 0.4549428343499031,
                    "h": 215.93902587890625,
                    "point_id": 75878,
                    "row_index": 5,
                    "w": 20.74018669128418
                },
                {
                    "collection_id": 2206,
                    "direction_sign": -1,
                    "grid_distance_to_anchor": 0.012103244104030204,
                    "h": 215.59754943847656,
                    "point_id": 75879,
                    "row_index": 6,
                    "w": 21.05425453186035
                },
                {
                    "collection_id": 2206,
                    "direction_sign": -1,
                    "grid_distance_to_anchor": 4.134261311401122,
                    "h": 211.5221405029297,
                    "point_id": 75880,
                    "row_index": 7,
                    "w": 21.673994064331055
                },
                {
                    "collection_id": 2206,
                    "direction_sign": 1,
                    "grid_distance_to_anchor": 1.1470506810286467,
                    "h": 215.6183624267578,
                    "point_id": 75881,
                    "row_index": 8,
                    "w": 22.201026916503906
                },
                {
                    "collection_id": 2206,
                    "direction_sign": -1,
                    "grid_distance_to_anchor": 1.7208681002369761,
                    "h": 215.6168670654297,
                    "point_id": 75882,
                    "row_index": 9,
                    "w": 22.77486228942871
                },
                {
                    "collection_id": 2206,
                    "direction_sign": -1,
                    "grid_distance_to_anchor": 1.94545609539847,
                    "h": 215.62045288085938,
                    "point_id": 75883,
                    "row_index": 10,
                    "w": 22.999435424804688
                }
            ],
            "projected_w_span_grid": 4.900701522827148,
            "projected_w_span_vx": 245.03507614135742,
            "projection_mode": "normal-line",
            "skipped_point_count": 0,
            "skipped_points": [],
            "skipped_reasons": {},
            "usable_point_count": 11,
            "windings": 1
        },
        "args": {
            "approval-inpaint": false,
            "approval-inpaint-corr-spacing": null,
            "approval-inpaint-output-mask": false,
            "approval-inpaint-output-mask-dilate": 3,
            "approval-inpaint-padding-frac": 0.25,
            "approval-inpaint-tifxyz": null,
            "corr-point-roi": true,
            "corr-point-roi-init-margin": 80,
            "corr-point-roi-output-radius": 20,
            "crop": null,
            "cuda-gridsample": 1,
            "depth": 1,
            "device": "cuda",
            "downscale": 4.0,
            "erode-valid-mask": 0,
            "flatten-solver": "torch",
            "init-mode": "shell-dir-crop",
            "input": "/ephemeral/lasag_strip_outputs/.lasagna_point_strip_work/collection_2206/point_strip.lasagna.json",
            "mesh-h": 32,
            "mesh-step": 50,
            "mesh-w": 32,
            "model-h": 8220.844268798828,
            "model-init": "seed",
            "model-input": null,
            "model-output": "/tmp/fit_reopt_np_8zgrb/model_reopt.pt",
            "model-w": 8245.035076141357,
            "model-w-unit": "voxels",
            "normal-mask-zero": 0,
            "out-dir": null,
            "progress": true,
            "pyramid-d": false,
            "seed": [
                21595.986328125,
                9700.78515625,
                36000.0
            ],
            "snapshot-interval": 1000,
            "sparse-prefetch-backend": "tensorstore",
            "subsample-mesh": 4,
            "subsample-winding": 4,
            "tifxyz-flow-gate-channels": true,
            "tifxyz-init": null,
            "winding-step": 25,
            "winding-volume": null,
            "windings": 1,
            "z-center": 0.0
        },
        "base": {
            "bend": 100.0,
            "corr": 0.0001,
            "data": 0.0,
            "data_plain": 0.0,
            "ext_offset": 0.0,
            "normal": 1.0,
            "pred_dt": 0.001,
            "smooth": 10.0,
            "station_n": 0.1,
            "station_t": 0.1,
            "step": 10.0,
            "winding_density": 0.01
        },
        "corr_points": {
            "collections": {
                "2206": {
                    "color": [
                        1.0,
                        0.1568627506494522,
                        0.1568627506494522
                    ],
                    "metadata": {
                        "winding_is_absolute": true
                    },
                    "name": "same_wrap1676",
                    "points": {
                        "75873": {
                            "creation_time": 1779554971334,
                            "p": [
                                20990.7265625,
                                9746.587890625,
                                36000.0
                            ],
                            "wind_a": 0.0
                        },
                        "75874": {
                            "creation_time": 1779554971334,
                            "p": [
                                21101.6015625,
                                9724.55859375,
                                36000.0
                            ],
                            "wind_a": 0.0
                        },
                        "75875": {
                            "creation_time": 1779554971334,
                            "p": [
                                21212.326171875,
                                9702.1650390625,
                                36000.0
                            ],
                            "wind_a": 0.0
                        },
                        "75876": {
                            "creation_time": 1779554971334,
                            "p": [
                                21316.224609375,
                                9663.294921875,
                                36000.0
                            ],
                            "wind_a": 0.0
                        },
                        "75877": {
                            "creation_time": 1779554971334,
                            "p": [
                                21419.587890625,
                                9623.130859375,
                                36000.0
                            ],
                            "wind_a": 0.0
                        },
                        "75878": {
                            "creation_time": 1779554971334,
                            "p": [
                                21530.923828125,
                                9613.3193359375,
                                36000.0
                            ],
                            "wind_a": 0.0
                        },
                        "75879": {
                            "creation_time": 1779554971334,
                            "p": [
                                21595.986328125,
                                9700.78515625,
                                36000.0
                            ],
                            "wind_a": 0.0
                        },
                        "75880": {
                            "creation_time": 1779554971334,
                            "p": [
                                21612.64453125,
                                9813.8857421875,
                                36000.0
                            ],
                            "wind_a": 0.0
                        },
                        "75881": {
                            "creation_time": 1779554971334,
                            "p": [
                                21612.64453125,
                                9933.884765625,
                                36000.0
                            ],
                            "wind_a": 0.0
                        },
                        "75882": {
                            "creation_time": 1779554971334,
                            "p": [
                                21595.986328125,
                                10046.9853515625,
                                36000.0
                            ],
                            "wind_a": 0.0
                        },
                        "75883": {
                            "creation_time": 1779554971334,
                            "p": [
                                21590.43359375,
                                10090.86328125,
                                36000.0
                            ],
                            "wind_a": 0.0
                        }
                    }
                }
            }
        },
        "lasagna_base_shape_zyx": [
            75784,
            32693,
            32693
        ],
        "stages": [
            {
                "lr": 0.1,
                "min_scaledown": 0,
                "name": "stage0",
                "params": [
                    "mesh_ms"
                ],
                "steps": 1000,
                "w_fac": {
                    "corr": 0.0,
                    "pred_dt": 0.0,
                    "station_n": 10.0,
                    "station_t": 10.0
                }
            },
            {
                "lr": 0.1,
                "min_scaledown": 0,
                "name": "stage1",
                "params": [
                    "mesh_ms"
                ],
                "steps": 1000,
                "w_fac": {
                    "pred_dt": 0.0,
                    "station_n": 10.0,
                    "station_t": 10.0
                }
            },
            {
                "lr": 0.01,
                "min_scaledown": 0,
                "name": "stage2",
                "params": [
                    "mesh_ms"
                ],
                "steps": 500,
                "w_fac": {
                    "pred_dt": 0.0,
                    "station_n": 10.0,
                    "station_t": 10.0
                }
            },
            {
                "_lr": [
                    10.0,
                    1.0,
                    0.1,
                    0.01,
                    0.001
                ],
                "args": {
                    "pred_dt_flow_gate": {
                        "anticipatory_pull": {
                            "_debug_roi_center_xyz": [
                                17499,
                                13412,
                                51144
                            ],
                            "debug_roi_k": 8,
                            "debug_roi_root_min": 0.5,
                            "debug_roi_tip_max": 0.5,
                            "debug_slice_upsample": 8,
                            "enabled": true,
                            "inlier_one": 120.0,
                            "inlier_zero": 80.0,
                            "loss_weight": 2.0,
                            "samples": 8
                        },
                        "backtrack_distance": 50.0,
                        "debug": false,
                        "debug_out_dir": "/home/ubuntu/villa/lasagna",
                        "debug_vis_interval": 0,
                        "enabled": true,
                        "gate_factor": 1.0,
                        "local_boost": 0.5
                    },
                    "status_interval": 10
                },
                "dlr": [
                    1.0,
                    0.1,
                    0.01,
                    0.001,
                    0.0001
                ],
                "lr": 1.0,
                "min_scaledown": 0,
                "name": "snap",
                "params": [
                    "mesh_ms"
                ],
                "steps": 500
            }
        ],
        "vc3d_volume_shape_zyx": [
            18946,
            8174,
            8174
        ]
    },
    "format": "tifxyz",
    "lasagna_base_shape_zyx": [
        75784,
        32693,
        32693
    ],
    "lasagna_job": {
        "config": {
            "args": {
                "corr-point-roi": true,
                "corr-point-roi-init-margin": 80,
                "corr-point-roi-output-radius": 20,
                "init-mode": "shell-dir-crop",
                "mesh-step": 50.0,
                "model-h": 5000.0,
                "model-init": "seed",
                "model-w": 5000.0,
                "model-w-unit": "voxels",
                "seed": [
                    5382.73095703125,
                    2403.329833984375,
                    9000.0
                ],
                "tifxyz-flow-gate-channels": true,
                "windings": 1
            },
            "base": {
                "bend": 100.0,
                "corr": 0.0001,
                "data": 0.0,
                "data_plain": 0.0,
                "ext_offset": 0.0,
                "normal": 1.0,
                "pred_dt": 0.001,
                "smooth": 10.0,
                "station_n": 0.1,
                "station_t": 0.1,
                "step": 10.0,
                "winding_density": 0.01
            },
            "corr_points": {
                "collections": {
                    "2206": {
                        "color": [
                            1.0,
                            0.1568627506494522,
                            0.1568627506494522
                        ],
                        "metadata": {
                            "winding_is_absolute": true
                        },
                        "name": "same_wrap1676",
                        "points": {
                            "75873": {
                                "creation_time": 1779554971334,
                                "p": [
                                    5247.681640625,
                                    2436.64697265625,
                                    9000.0
                                ],
                                "wind_a": 0.0
                            },
                            "75874": {
                                "creation_time": 1779554971334,
                                "p": [
                                    5275.400390625,
                                    2431.1396484375,
                                    9000.0
                                ],
                                "wind_a": 0.0
                            },
                            "75875": {
                                "creation_time": 1779554971334,
                                "p": [
                                    5303.08154296875,
                                    2425.541259765625,
                                    9000.0
                                ],
                                "wind_a": 0.0
                            },
                            "75876": {
                                "creation_time": 1779554971334,
                                "p": [
                                    5329.05615234375,
                                    2415.82373046875,
                                    9000.0
                                ],
                                "wind_a": 0.0
                            },
                            "75877": {
                                "creation_time": 1779554971334,
                                "p": [
                                    5354.89697265625,
                                    2405.78271484375,
                                    9000.0
                                ],
                                "wind_a": 0.0
                            },
                            "75878": {
                                "creation_time": 1779554971334,
                                "p": [
                                    5382.73095703125,
                                    2403.329833984375,
                                    9000.0
                                ],
                                "wind_a": 0.0
                            },
                            "75879": {
                                "creation_time": 1779554971334,
                                "p": [
                                    5398.99658203125,
                                    2425.1962890625,
                                    9000.0
                                ],
                                "wind_a": 0.0
                            },
                            "75880": {
                                "creation_time": 1779554971334,
                                "p": [
                                    5403.1611328125,
                                    2453.471435546875,
                                    9000.0
                                ],
                                "wind_a": 0.0
                            },
                            "75881": {
                                "creation_time": 1779554971334,
                                "p": [
                                    5403.1611328125,
                                    2483.47119140625,
                                    9000.0
                                ],
                                "wind_a": 0.0
                            },
                            "75882": {
                                "creation_time": 1779554971334,
                                "p": [
                                    5398.99658203125,
                                    2511.746337890625,
                                    9000.0
                                ],
                                "wind_a": 0.0
                            },
                            "75883": {
                                "creation_time": 1779554971334,
                                "p": [
                                    5397.6083984375,
                                    2522.7158203125,
                                    9000.0
                                ],
                                "wind_a": 0.0
                            }
                        }
                    }
                }
            },
            "stages": [
                {
                    "lr": 0.1,
                    "min_scaledown": 0,
                    "name": "stage0",
                    "params": [
                        "mesh_ms"
                    ],
                    "steps": 1000,
                    "w_fac": {
                        "corr": 0.0,
                        "pred_dt": 0.0,
                        "station_n": 10.0,
                        "station_t": 10.0
                    }
                },
                {
                    "lr": 0.1,
                    "min_scaledown": 0,
                    "name": "stage1",
                    "params": [
                        "mesh_ms"
                    ],
                    "steps": 1000,
                    "w_fac": {
                        "pred_dt": 0.0,
                        "station_n": 10.0,
                        "station_t": 10.0
                    }
                },
                {
                    "lr": 0.01,
                    "min_scaledown": 0,
                    "name": "stage2",
                    "params": [
                        "mesh_ms"
                    ],
                    "steps": 500,
                    "w_fac": {
                        "pred_dt": 0.0,
                        "station_n": 10.0,
                        "station_t": 10.0
                    }
                },
                {
                    "_lr": [
                        10.0,
                        1.0,
                        0.1,
                        0.01,
                        0.001
                    ],
                    "args": {
                        "pred_dt_flow_gate": {
                            "anticipatory_pull": {
                                "_debug_roi_center_xyz": [
                                    17499,
                                    13412,
                                    51144
                                ],
                                "debug_roi_k": 8,
                                "debug_roi_root_min": 0.5,
                                "debug_roi_tip_max": 0.5,
                                "debug_slice_upsample": 8,
                                "enabled": true,
                                "inlier_one": 120.0,
                                "inlier_zero": 80.0,
                                "loss_weight": 2.0,
                                "samples": 8
                            },
                            "backtrack_distance": 50.0,
                            "debug": false,
                            "debug_out_dir": "/home/ubuntu/villa/lasagna",
                            "debug_vis_interval": 0,
                            "enabled": true,
                            "gate_factor": 1.0,
                            "local_boost": 0.5
                        },
                        "status_interval": 10
                    },
                    "dlr": [
                        1.0,
                        0.1,
                        0.01,
                        0.001,
                        0.0001
                    ],
                    "lr": 1.0,
                    "min_scaledown": 0,
                    "name": "snap",
                    "params": [
                        "mesh_ms"
                    ],
                    "steps": 500
                }
            ]
        },
        "linked_surfaces": [],
        "model": null,
        "volume_shape_zyx": [
            18946,
            8174,
            8174
        ]
    },
    "model_source": "/tmp/fit_reopt_np_8zgrb/model_reopt.pt",
    "scale": [
        0.07999999821186066,
        0.07999999821186066
    ],
    "tags": {
        "date_last_modified": "20260614185644388",
        "reviewed": {
            "date": "20260604080934241"
        }
    },
    "type": "seg",
    "uuid": "same_wrap001676_lasagna"
}