{
    "area_vx2": 399375.0,
    "base_shape_zyx": [
        18946,
        8174,
        8174
    ],
    "bbox": [
        [
            6317.8544921875,
            4148.5185546875,
            9159.6748046875
        ],
        [
            6574.17431640625,
            4682.72119140625,
            9859.0810546875
        ]
    ],
    "extra_channels": [
        {
            "dtype": "float32",
            "file": "flow_gate_local_contrast.tif",
            "name": "flow_gate_local_contrast",
            "range": [
                0.0,
                1.0
            ],
            "source": "pred_dt_flow_gate.local_contrast",
            "source_config": {
                "backtrack_distance": 50.0,
                "gate_factor": 1.0,
                "grid_step": 4,
                "local_boost": 0.5
            }
        },
        {
            "dtype": "float32",
            "file": "flow_gate_component_normalized.tif",
            "name": "flow_gate_component_normalized",
            "range": [
                0.0,
                1.0
            ],
            "source": "pred_dt_flow_gate.component_normalized",
            "source_config": {
                "backtrack_distance": 50.0,
                "gate_factor": 1.0,
                "grid_step": 4,
                "local_boost": 0.5
            }
        }
    ],
    "fit_config": {
        "_corr_point_roi_init_": {
            "effective_seed": [
                25362.041015625,
                17650.19921875,
                38093.890625
            ],
            "final_anchor_h": 226.6417439430952,
            "final_anchor_w": 65.14160750806332,
            "final_shell_id": "shell_0002.tifxyz",
            "final_trim_bottom": 34,
            "final_trim_top": 0,
            "init_margin_grid_points": 80,
            "initial_seed": [
                25376.55078125,
                17654.134765625,
                38167.66015625
            ],
            "initial_shell_id": "shell_0002.tifxyz",
            "initial_skipped_point_count": 0,
            "initial_skipped_reasons": {},
            "initial_trim_bottom": 34,
            "initial_trim_top": 0,
            "initial_usable_point_count": 15,
            "mode": "corr-point-roi",
            "model_h": 8309.660339355469,
            "model_w": 8019.619369506836,
            "model_w_unit": "voxels",
            "output_radius_grid_points": 20,
            "parsed_point_count": 15,
            "projected_h_span_grid": 6.193206787109375,
            "projected_h_span_vx": 309.66033935546875,
            "projected_points": [
                {
                    "collection_id": 797,
                    "direction_sign": 1,
                    "grid_distance_to_anchor": 1.8647664459881896,
                    "h": 224.79776000976563,
                    "point_id": 89315,
                    "row_index": 0,
                    "w": 65.41923522949219
                },
                {
                    "collection_id": 797,
                    "direction_sign": 1,
                    "grid_distance_to_anchor": 1.6455964387643025,
                    "h": 225.0120849609375,
                    "point_id": 89316,
                    "row_index": 1,
                    "w": 65.37007904052734
                },
                {
                    "collection_id": 797,
                    "direction_sign": 1,
                    "grid_distance_to_anchor": 1.3285377840489758,
                    "h": 225.32115173339844,
                    "point_id": 89317,
                    "row_index": 2,
                    "w": 65.28668975830078
                },
                {
                    "collection_id": 797,
                    "direction_sign": 1,
                    "grid_distance_to_anchor": 0.9590136551944675,
                    "h": 225.68997192382813,
                    "point_id": 89318,
                    "row_index": 3,
                    "w": 65.25923919677734
                },
                {
                    "collection_id": 797,
                    "direction_sign": -1,
                    "grid_distance_to_anchor": 3.994811704121713,
                    "h": 222.65797424316406,
                    "point_id": 89319,
                    "row_index": 4,
                    "w": 65.43842315673828
                },
                {
                    "collection_id": 797,
                    "direction_sign": -1,
                    "grid_distance_to_anchor": 0.4587943116027702,
                    "h": 226.18939208984375,
                    "point_id": 89320,
                    "row_index": 5,
                    "w": 65.21822357177734
                },
                {
                    "collection_id": 797,
                    "direction_sign": -1,
                    "grid_distance_to_anchor": 0.05881279548119251,
                    "h": 226.6475372314453,
                    "point_id": 89321,
                    "row_index": 6,
                    "w": 65.20013427734375
                },
                {
                    "collection_id": 797,
                    "direction_sign": -1,
                    "grid_distance_to_anchor": 0.30329900973536644,
                    "h": 226.92568969726563,
                    "point_id": 89322,
                    "row_index": 7,
                    "w": 65.24821472167969
                },
                {
                    "collection_id": 797,
                    "direction_sign": -1,
                    "grid_distance_to_anchor": 0.5824358088884518,
                    "h": 227.2063446044922,
                    "point_id": 89323,
                    "row_index": 8,
                    "w": 65.28463745117188
                },
                {
                    "collection_id": 797,
                    "direction_sign": -1,
                    "grid_distance_to_anchor": 0.8797438290093454,
                    "h": 227.50233459472656,
                    "point_id": 89324,
                    "row_index": 9,
                    "w": 65.32418060302734
                },
                {
                    "collection_id": 797,
                    "direction_sign": -1,
                    "grid_distance_to_anchor": 1.299438853561972,
                    "h": 227.9199981689453,
                    "point_id": 89325,
                    "row_index": 10,
                    "w": 65.37528991699219
                },
                {
                    "collection_id": 797,
                    "direction_sign": -1,
                    "grid_distance_to_anchor": 1.7450692559552086,
                    "h": 228.3623504638672,
                    "point_id": 89326,
                    "row_index": 11,
                    "w": 65.43277740478516
                },
                {
                    "collection_id": 797,
                    "direction_sign": -1,
                    "grid_distance_to_anchor": 1.9599038980343961,
                    "h": 228.57176208496094,
                    "point_id": 89327,
                    "row_index": 12,
                    "w": 65.4825668334961
                },
                {
                    "collection_id": 797,
                    "direction_sign": -1,
                    "grid_distance_to_anchor": 2.1655806509215103,
                    "h": 228.76890563964844,
                    "point_id": 89328,
                    "row_index": 13,
                    "w": 65.54771423339844
                },
                {
                    "collection_id": 797,
                    "direction_sign": -1,
                    "grid_distance_to_anchor": 2.254980226379269,
                    "h": 228.85118103027344,
                    "point_id": 89329,
                    "row_index": 14,
                    "w": 65.59252166748047
                }
            ],
            "projected_w_span_grid": 0.39238739013671875,
            "projected_w_span_vx": 19.619369506835938,
            "projection_mode": "normal-line",
            "skipped_point_count": 0,
            "skipped_points": [],
            "skipped_reasons": {},
            "usable_point_count": 15,
            "windings": 1
        },
        "args": {
            "approval-inpaint": false,
            "approval-inpaint-corr-spacing": null,
            "approval-inpaint-output-mask": false,
            "approval-inpaint-output-mask-dilate": 3,
            "approval-inpaint-padding-frac": 0.25,
            "approval-inpaint-tifxyz": null,
            "corr-point-roi": true,
            "corr-point-roi-init-margin": 80,
            "corr-point-roi-output-radius": 20,
            "crop": null,
            "cuda-gridsample": 1,
            "depth": 1,
            "device": "cuda",
            "downscale": 4.0,
            "erode-valid-mask": 0,
            "flatten-solver": "torch",
            "init-mode": "shell-dir-crop",
            "input": "/ephemeral/lasag_strip_outputs/.lasagna_point_strip_work/collection_797/point_strip.lasagna.json",
            "mesh-h": 32,
            "mesh-step": 50,
            "mesh-w": 32,
            "model-h": 8309.660339355469,
            "model-init": "seed",
            "model-input": null,
            "model-output": "/tmp/fit_reopt_nvgt6_1d/model_reopt.pt",
            "model-w": 8019.619369506836,
            "model-w-unit": "voxels",
            "normal-mask-zero": 0,
            "out-dir": null,
            "progress": true,
            "pyramid-d": false,
            "seed": [
                25362.041015625,
                17650.19921875,
                38093.890625
            ],
            "snapshot-interval": 1000,
            "sparse-prefetch-backend": "tensorstore",
            "subsample-mesh": 4,
            "subsample-winding": 4,
            "tifxyz-flow-gate-channels": true,
            "tifxyz-init": null,
            "winding-step": 25,
            "winding-volume": null,
            "windings": 1,
            "z-center": 0.0
        },
        "base": {
            "bend": 100.0,
            "corr": 0.0001,
            "data": 0.0,
            "data_plain": 0.0,
            "ext_offset": 0.0,
            "normal": 1.0,
            "pred_dt": 0.001,
            "smooth": 10.0,
            "station_n": 0.1,
            "station_t": 0.1,
            "step": 10.0,
            "winding_density": 0.01
        },
        "corr_points": {
            "collections": {
                "797": {
                    "color": [
                        0.0,
                        0.7450980544090271,
                        0.6274510025978088
                    ],
                    "metadata": {
                        "winding_is_absolute": true
                    },
                    "name": "same_wrap2041",
                    "points": {
                        "89315": {
                            "creation_time": 1779581587005,
                            "p": [
                                25420.080078125,
                                17665.94140625,
                                37651.25
                            ],
                            "wind_a": 0.0
                        },
                        "89316": {
                            "creation_time": 1779581587005,
                            "p": [
                                25388.568359375,
                                17657.39453125,
                                37717.7265625
                            ],
                            "wind_a": 0.0
                        },
                        "89317": {
                            "creation_time": 1779581587005,
                            "p": [
                                25369.296875,
                                17652.16796875,
                                37789.453125
                            ],
                            "wind_a": 0.0
                        },
                        "89318": {
                            "creation_time": 1779581587005,
                            "p": [
                                25353.7578125,
                                17647.953125,
                                37862.7890625
                            ],
                            "wind_a": 0.0
                        },
                        "89319": {
                            "creation_time": 1779581587005,
                            "p": [
                                25349.734375,
                                17646.861328125,
                                37939.171875
                            ],
                            "wind_a": 0.0
                        },
                        "89320": {
                            "creation_time": 1779581587005,
                            "p": [
                                25358.4140625,
                                17649.216796875,
                                38015.4453125
                            ],
                            "wind_a": 0.0
                        },
                        "89321": {
                            "creation_time": 1779581587005,
                            "p": [
                                25362.041015625,
                                17650.19921875,
                                38093.890625
                            ],
                            "wind_a": 0.0
                        },
                        "89322": {
                            "creation_time": 1779581587005,
                            "p": [
                                25376.55078125,
                                17654.134765625,
                                38167.66015625
                            ],
                            "wind_a": 0.0
                        },
                        "89323": {
                            "creation_time": 1779581587005,
                            "p": [
                                25394.6875,
                                17659.0546875,
                                38239.875
                            ],
                            "wind_a": 0.0
                        },
                        "89324": {
                            "creation_time": 1779581587005,
                            "p": [
                                25422.65234375,
                                17666.638671875,
                                38307.875
                            ],
                            "wind_a": 0.0
                        },
                        "89325": {
                            "creation_time": 1779581587005,
                            "p": [
                                25451.59765625,
                                17674.490234375,
                                38375.453125
                            ],
                            "wind_a": 0.0
                        },
                        "89326": {
                            "creation_time": 1779581587005,
                            "p": [
                                25481.744140625,
                                17682.666015625,
                                38442.515625
                            ],
                            "wind_a": 0.0
                        },
                        "89327": {
                            "creation_time": 1779581587005,
                            "p": [
                                25517.1875,
                                17692.279296875,
                                38507.3046875
                            ],
                            "wind_a": 0.0
                        },
                        "89328": {
                            "creation_time": 1779581587005,
                            "p": [
                                25558.958984375,
                                17703.609375,
                                38569.375
                            ],
                            "wind_a": 0.0
                        },
                        "89329": {
                            "creation_time": 1779581587005,
                            "p": [
                                25583.30859375,
                                17710.21484375,
                                38594.60546875
                            ],
                            "wind_a": 0.0
                        }
                    }
                }
            }
        },
        "lasagna_base_shape_zyx": [
            75784,
            32693,
            32693
        ],
        "stages": [
            {
                "lr": 0.1,
                "min_scaledown": 0,
                "name": "stage0",
                "params": [
                    "mesh_ms"
                ],
                "steps": 1000,
                "w_fac": {
                    "corr": 0.0,
                    "pred_dt": 0.0,
                    "station_n": 10.0,
                    "station_t": 10.0
                }
            },
            {
                "lr": 0.1,
                "min_scaledown": 0,
                "name": "stage1",
                "params": [
                    "mesh_ms"
                ],
                "steps": 1000,
                "w_fac": {
                    "pred_dt": 0.0,
                    "station_n": 10.0,
                    "station_t": 10.0
                }
            },
            {
                "lr": 0.01,
                "min_scaledown": 0,
                "name": "stage2",
                "params": [
                    "mesh_ms"
                ],
                "steps": 500,
                "w_fac": {
                    "pred_dt": 0.0,
                    "station_n": 10.0,
                    "station_t": 10.0
                }
            },
            {
                "_lr": [
                    10.0,
                    1.0,
                    0.1,
                    0.01,
                    0.001
                ],
                "args": {
                    "pred_dt_flow_gate": {
                        "anticipatory_pull": {
                            "_debug_roi_center_xyz": [
                                17499,
                                13412,
                                51144
                            ],
                            "debug_roi_k": 8,
                            "debug_roi_root_min": 0.5,
                            "debug_roi_tip_max": 0.5,
                            "debug_slice_upsample": 8,
                            "enabled": true,
                            "inlier_one": 120.0,
                            "inlier_zero": 80.0,
                            "loss_weight": 2.0,
                            "samples": 8
                        },
                        "backtrack_distance": 50.0,
                        "debug": false,
                        "debug_out_dir": "/home/ubuntu/villa/lasagna",
                        "debug_vis_interval": 0,
                        "enabled": true,
                        "gate_factor": 1.0,
                        "local_boost": 0.5
                    },
                    "status_interval": 10
                },
                "dlr": [
                    1.0,
                    0.1,
                    0.01,
                    0.001,
                    0.0001
                ],
                "lr": 1.0,
                "min_scaledown": 0,
                "name": "snap",
                "params": [
                    "mesh_ms"
                ],
                "steps": 500
            }
        ],
        "vc3d_volume_shape_zyx": [
            18946,
            8174,
            8174
        ]
    },
    "format": "tifxyz",
    "lasagna_base_shape_zyx": [
        75784,
        32693,
        32693
    ],
    "lasagna_job": {
        "config": {
            "args": {
                "corr-point-roi": true,
                "corr-point-roi-init-margin": 80,
                "corr-point-roi-output-radius": 20,
                "init-mode": "shell-dir-crop",
                "mesh-step": 50.0,
                "model-h": 5000.0,
                "model-init": "seed",
                "model-w": 5000.0,
                "model-w-unit": "voxels",
                "seed": [
                    6344.1376953125,
                    4413.53369140625,
                    9541.9150390625
                ],
                "tifxyz-flow-gate-channels": true,
                "windings": 1
            },
            "base": {
                "bend": 100.0,
                "corr": 0.0001,
                "data": 0.0,
                "data_plain": 0.0,
                "ext_offset": 0.0,
                "normal": 1.0,
                "pred_dt": 0.001,
                "smooth": 10.0,
                "station_n": 0.1,
                "station_t": 0.1,
                "step": 10.0,
                "winding_density": 0.01
            },
            "corr_points": {
                "collections": {
                    "797": {
                        "color": [
                            0.0,
                            0.7450980544090271,
                            0.6274510025978088
                        ],
                        "metadata": {
                            "winding_is_absolute": true
                        },
                        "name": "same_wrap2041",
                        "points": {
                            "89315": {
                                "creation_time": 1779581587005,
                                "p": [
                                    6355.02001953125,
                                    4416.4853515625,
                                    9412.8125
                                ],
                                "wind_a": 0.0
                            },
                            "89316": {
                                "creation_time": 1779581587005,
                                "p": [
                                    6347.14208984375,
                                    4414.3486328125,
                                    9429.431640625
                                ],
                                "wind_a": 0.0
                            },
                            "89317": {
                                "creation_time": 1779581587005,
                                "p": [
                                    6342.32421875,
                                    4413.0419921875,
                                    9447.36328125
                                ],
                                "wind_a": 0.0
                            },
                            "89318": {
                                "creation_time": 1779581587005,
                                "p": [
                                    6338.439453125,
                                    4411.98828125,
                                    9465.697265625
                                ],
                                "wind_a": 0.0
                            },
                            "89319": {
                                "creation_time": 1779581587005,
                                "p": [
                                    6337.43359375,
                                    4411.71533203125,
                                    9484.79296875
                                ],
                                "wind_a": 0.0
                            },
                            "89320": {
                                "creation_time": 1779581587005,
                                "p": [
                                    6339.603515625,
                                    4412.30419921875,
                                    9503.861328125
                                ],
                                "wind_a": 0.0
                            },
                            "89321": {
                                "creation_time": 1779581587005,
                                "p": [
                                    6340.51025390625,
                                    4412.5498046875,
                                    9523.47265625
                                ],
                                "wind_a": 0.0
                            },
                            "89322": {
                                "creation_time": 1779581587005,
                                "p": [
                                    6344.1376953125,
                                    4413.53369140625,
                                    9541.9150390625
                                ],
                                "wind_a": 0.0
                            },
                            "89323": {
                                "creation_time": 1779581587005,
                                "p": [
                                    6348.671875,
                                    4414.763671875,
                                    9559.96875
                                ],
                                "wind_a": 0.0
                            },
                            "89324": {
                                "creation_time": 1779581587005,
                                "p": [
                                    6355.6630859375,
                                    4416.65966796875,
                                    9576.96875
                                ],
                                "wind_a": 0.0
                            },
                            "89325": {
                                "creation_time": 1779581587005,
                                "p": [
                                    6362.8994140625,
                                    4418.62255859375,
                                    9593.86328125
                                ],
                                "wind_a": 0.0
                            },
                            "89326": {
                                "creation_time": 1779581587005,
                                "p": [
                                    6370.43603515625,
                                    4420.66650390625,
                                    9610.62890625
                                ],
                                "wind_a": 0.0
                            },
                            "89327": {
                                "creation_time": 1779581587005,
                                "p": [
                                    6379.296875,
                                    4423.06982421875,
                                    9626.826171875
                                ],
                                "wind_a": 0.0
                            },
                            "89328": {
                                "creation_time": 1779581587005,
                                "p": [
                                    6389.73974609375,
                                    4425.90234375,
                                    9642.34375
                                ],
                                "wind_a": 0.0
                            },
                            "89329": {
                                "creation_time": 1779581587005,
                                "p": [
                                    6395.8271484375,
                                    4427.5537109375,
                                    9648.6513671875
                                ],
                                "wind_a": 0.0
                            }
                        }
                    }
                }
            },
            "stages": [
                {
                    "lr": 0.1,
                    "min_scaledown": 0,
                    "name": "stage0",
                    "params": [
                        "mesh_ms"
                    ],
                    "steps": 1000,
                    "w_fac": {
                        "corr": 0.0,
                        "pred_dt": 0.0,
                        "station_n": 10.0,
                        "station_t": 10.0
                    }
                },
                {
                    "lr": 0.1,
                    "min_scaledown": 0,
                    "name": "stage1",
                    "params": [
                        "mesh_ms"
                    ],
                    "steps": 1000,
                    "w_fac": {
                        "pred_dt": 0.0,
                        "station_n": 10.0,
                        "station_t": 10.0
                    }
                },
                {
                    "lr": 0.01,
                    "min_scaledown": 0,
                    "name": "stage2",
                    "params": [
                        "mesh_ms"
                    ],
                    "steps": 500,
                    "w_fac": {
                        "pred_dt": 0.0,
                        "station_n": 10.0,
                        "station_t": 10.0
                    }
                },
                {
                    "_lr": [
                        10.0,
                        1.0,
                        0.1,
                        0.01,
                        0.001
                    ],
                    "args": {
                        "pred_dt_flow_gate": {
                            "anticipatory_pull": {
                                "_debug_roi_center_xyz": [
                                    17499,
                                    13412,
                                    51144
                                ],
                                "debug_roi_k": 8,
                                "debug_roi_root_min": 0.5,
                                "debug_roi_tip_max": 0.5,
                                "debug_slice_upsample": 8,
                                "enabled": true,
                                "inlier_one": 120.0,
                                "inlier_zero": 80.0,
                                "loss_weight": 2.0,
                                "samples": 8
                            },
                            "backtrack_distance": 50.0,
                            "debug": false,
                            "debug_out_dir": "/home/ubuntu/villa/lasagna",
                            "debug_vis_interval": 0,
                            "enabled": true,
                            "gate_factor": 1.0,
                            "local_boost": 0.5
                        },
                        "status_interval": 10
                    },
                    "dlr": [
                        1.0,
                        0.1,
                        0.01,
                        0.001,
                        0.0001
                    ],
                    "lr": 1.0,
                    "min_scaledown": 0,
                    "name": "snap",
                    "params": [
                        "mesh_ms"
                    ],
                    "steps": 500
                }
            ]
        },
        "linked_surfaces": [],
        "model": null,
        "volume_shape_zyx": [
            18946,
            8174,
            8174
        ]
    },
    "model_source": "/tmp/fit_reopt_nvgt6_1d/model_reopt.pt",
    "scale": [
        0.07999999821186066,
        0.07999999821186066
    ],
    "tags": {
        "date_last_modified": "20260614185644475",
        "reviewed": {
            "date": "20260604080934259"
        }
    },
    "type": "seg",
    "uuid": "same_wrap002041_lasagna"
}